GeDaC RNA-seq pipeline Walkthrough: How does the pipeline work?
Part 2: Guiding users through the architecture of the RNA-seq pipeline
Cancer Science Institute of Singapore
The Genomics and Data Analytics Core (GeDaC) at the Cancer Science Institute of Singapore (CSI) is designed to meet the increasing need of bioinformatics and computational support for institute labs.
Our core focus points
Providing expert guidance and support in bioinformatics, including data analysis, interpretation, and visualization to help researchers achieve their scientific goals.
A centralized platform providing access to all GeDaC services, resources, and tools for efficient bioinformatics research and collaboration.
Secure and scalable solutions for storing, managing, and accessing large volumes of genomic and bioinformatics data.
Custom software solutions tailored to meet the specific needs of bioinformatics research, including data analysis pipelines and visualization tools.
Discover how GeDaC serves as the ideal solution for diverse research needs, providing customized services and tools to accelerate scientific discovery and enhance data-driven research outcomes.
GeDaC offers comprehensive bioinformatics support for academic research. Whether you are conducting genomics, transcriptomics, or proteomics research, our platform provides seamless data management and analysis solutions. Leveraging AWS infrastructure and cutting-edge pipelines like nf-core, GeDaC ensures your research is scalable, reproducible, and efficient.
Empower researchers to focus on scientific discovery by automating complex analysis tasks.
Streamline data handling with secure, scalable cloud infrastructure.
Utilize customizable, reproducible pipelines to generate high-quality results.
Enhance collaboration by providing access to data and results through an intuitive web portal.
Our Storage unit is responsible for the maintenance of CSI servers and storage management such as backup and archiving. The unit also provides support for the institute’s cloud computing transition, security, and network maintenance.
GeDaC Cloud Flow provides a streamlined data processing pipeline that enables efficient management and analysis of bioinformatics data. Utilizing cloud infrastructure, it facilitates scalability and reproducibility, allowing researchers to focus on their scientific discoveries without the hassle of data handling.
Our Consultation Project offers tailored guidance for researchers seeking to optimize their bioinformatics workflows. Our experts work closely with your team to understand your specific needs and provide actionable insights, ensuring that your research projects are efficient and successful.
The N2CR Avatar Portal serves as a user-friendly interface for accessing and managing cancer models. It allows researchers to easily submit Patitent derived models and enhancing collaboration and transparency throughout the research process.
Our Core Lab offers a range of bioinformatics services, including data analysis, pipeline development, and customized support for genomics, transcriptomics, proteomics, and more. We also provide consultations to help design experiments and optimize data processing workflows.
Yes, we can develop and customize pipelines based on the specific needs of your project. Whether you're working on high-throughput sequencing data, metagenomics, or single-cell analysis, our team can tailor the solution to fit your research requirements.
No prior bioinformatics knowledge is required. Our team will guide you through every step of the process, from project consultation to data analysis. We ensure that our services are accessible to researchers from all backgrounds.
To get started, simply reach out to us via our contact form or email to discuss your project. We will schedule a consultation to assess your needs and provide a tailored service plan.
Have questions? Feel free to contact us using the form below. We're here to help!
support[at]gedac.org
Explore our collection of articles, guides, and tutorials on bioinformatics, computational biology, and more.
Part 2: Guiding users through the architecture of the RNA-seq pipeline
Part 1: Guiding users through the results of an RNA-seq experiment.
Beta release of our fully scalable and secure cloud-based bioinformatics service.